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    "textoCompleto" => "<span class="elsevierStyleSections"><p id="par0005" class="elsevierStylePara elsevierViewall">Spain has been among the hardest hit countries by COVID-19 worldwide&#44; particularly during the first wave and the ongoing sixth wave&#46;<a class="elsevierStyleCrossRef" href="#bib0105"><span class="elsevierStyleSup">1</span></a> There have been several successful attempts to forecast trends of incidence and mortality of COVID-19&#44; most based upon knowledge on viral dynamics from previous pandemics&#44; recent COVID-19 geographical information of diverse granularity&#44; and newly discovered viral characteristics&#46;<a class="elsevierStyleCrossRefs" href="#bib0110"><span class="elsevierStyleSup">2&#8211;4</span></a> However&#44; SARS-CoV-2 inherent poor quality RNAm copy-editing gene replication makes it prone to mutate and spontaneously create new variants of concern &#40;VoC&#41; &#40;<a class="elsevierStyleCrossRef" href="#fig0005">Fig&#46; 1</a>&#41;&#44;<a class="elsevierStyleCrossRef" href="#bib0125"><span class="elsevierStyleSup">5</span></a> that adapt to any hostile environment&#44; produce new outbreaks&#44; and modify existing epidemiological projections&#46;<a class="elsevierStyleCrossRef" href="#bib0130"><span class="elsevierStyleSup">6</span></a></p><elsevierMultimedia ident="fig0005"></elsevierMultimedia><p id="par0010" class="elsevierStylePara elsevierViewall">On November 26&#44; 2021&#44; WHO designated the variant B&#46;1&#46;1&#46;529 as a new VoC&#44; named Omicron&#44; originally identified in South Africa&#44;<a class="elsevierStyleCrossRef" href="#bib0135"><span class="elsevierStyleSup">7</span></a> on the evidence that mutations in Omicron may have an impact on how it spreads&#44; resistance to vaccination&#44; or the severity of illness it causes&#46;<a class="elsevierStyleCrossRef" href="#bib0140"><span class="elsevierStyleSup">8</span></a> In particular&#44; in South Africa up to December 2&#44; 2021 it was observed a doubling time for the first 3 days after the wave threshold of ten cases per 100<span class="elsevierStyleHsp" style=""></span>000 population&#46;<a class="elsevierStyleCrossRefs" href="#bib0145"><span class="elsevierStyleSup">9&#44;10</span></a> In Denmark&#44; a European leader in sequencing SARS-CoV-2 VoC&#44; where testing of all positive PCR tests is commonplace&#44; cases of Omicron were reported to double every second day&#44;<a class="elsevierStyleCrossRef" href="#bib0155"><span class="elsevierStyleSup">11</span></a> despite almost 75&#37; of those infected by Omicron had received full &#40;two doses of&#41; COVID-19 vaccination already&#46;</p><p id="par0015" class="elsevierStylePara elsevierViewall">We used our previous modelling algorithms&#44;<a class="elsevierStyleCrossRefs" href="#bib0160"><span class="elsevierStyleSup">12&#8211;14</span></a> to forecast the spread of Omicron in Spain&#44; and report trends in daily cases with a 7-day moving average and of new hospitalisations&#46; We followed EQUATOR&#39;s TRIPOD guidance for multivariable prediction models&#46;<a class="elsevierStyleCrossRef" href="#bib0175"><span class="elsevierStyleSup">15</span></a> By applying firstly a third-degree polynomial curve in existing epidemiological trends on the spread of Omicron in Spain&#44; starting from the first 17 days of the Omicron outbreak &#40;from December 12&#44; 2021&#41;&#44; and secondly a Gaussian curve following a parametric growth&#44;<a class="elsevierStyleCrossRefs" href="#bib0160"><span class="elsevierStyleSup">12&#8211;14</span></a> we were able to model new infections of COVID-19 in Spain&#46; Overall&#44; the worse scenario is forecasting up to 431&#44;348 COVID-19 daily infections on January&#44; 24&#44; 2022 while the &#8220;best&#8221; scenario is 247&#44;620 &#40;<a class="elsevierStyleCrossRef" href="#fig0010">Fig&#46; 2</a>&#41;&#46;</p><elsevierMultimedia ident="fig0010"></elsevierMultimedia><p id="par0020" class="elsevierStylePara elsevierViewall">Then we modelled these trends for new COVID-19 cases and hospital admissions using a new Gaussian curve to estimate a downward trend after a peak&#44;<a class="elsevierStyleCrossRef" href="#bib0180"><span class="elsevierStyleSup">16</span></a> and we obtained the expected curve of new COVID-19 infections in Spain&#44; and with a 5-day lag time&#44; new hospital admissions&#46; It will likely produce crowding in hospitals&#44; as new hospital admissions per day might peak on January 30&#44; 2022&#44; with a range in between 4210 &#40;&#8220;best&#8221; scenario&#41; and 7333 &#40;worse scenario&#41;&#46; Both epidemiological indicators will surpass previous rates observed in the previous five waves&#44; unless both individual and group interventions are taking place&#46; Beyond the futility of debating on an alleged lower severity of Omicron&#39;s acute COVID-19 clinical expression&#44; any further consequences on its sequelae and long COVID will require close monitoring&#46;<a class="elsevierStyleCrossRef" href="#bib0185"><span class="elsevierStyleSup">17</span></a></p><p id="par0025" class="elsevierStylePara elsevierViewall">In probability theory&#44; the conditional expectation of any warning system for an eventual surge of an infectious outbreak&#44; as could happen with Omicron substituting other SAR-CoV-2 VoC&#44; modifies &#40;reduces&#41; the eventual magnitude of the event itself&#46;<a class="elsevierStyleCrossRef" href="#bib0190"><span class="elsevierStyleSup">18</span></a> Given preliminary evidence from South Africa&#44; our forecast anticipates a large COVID-19 increase in Spain despite the high levels of vaccination&#46;<a class="elsevierStyleCrossRef" href="#bib0195"><span class="elsevierStyleSup">19</span></a> Therefore&#44; this warning is calling for further reinforcing of universal hygiene interventions &#40;indoor ventilation&#44; social distance&#44; and face masks&#41;&#44; and anticipating the need of new lockdowns&#44;<a class="elsevierStyleCrossRef" href="#bib0155"><span class="elsevierStyleSup">11</span></a> the latter being extremely detrimental to the economy&#46;</p><p id="par0030" class="elsevierStylePara elsevierViewall">All viruses change in time and space by natural or artificial Darwin&#39;s selection&#44; and survival of the fittest&#44;<a class="elsevierStyleCrossRef" href="#bib0200"><span class="elsevierStyleSup">20</span></a> due either to high levels of herd immunity or low vaccination coverage&#46; The toll associated with Omicron underlines WHO&#39;s COVID-19 message that &#8220;No one will be safe&#44; until the entire World is safe &#40;ergo vaccinated&#41;&#8221;&#46;</p><span id="sec0005" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0005">Funding</span><p id="par0035" class="elsevierStylePara elsevierViewall">None declared&#46;</p></span></span>"
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Scientific Letter
Forecasting COVID-19 Infection Trends and New Hospital Admissions in Spain due to SARS-CoV-2 Variant of Concern Omicron
Estimación de las tendencias de infección por COVID-19 y de nuevos ingresos hospitalarios en España debido a la variante Ómicron del SARS-CoV-2
Joan B. Sorianoa,b,c,
Corresponding author
jbsoriano2@gmail.com

Corresponding author.
, Alberto Giovanni Gerlid, Stefano Centannie,f, Julio Ancocheaa,b,c
a Servicio de Neumología, Hospital Universitario La Princesa, Madrid, Spain
b Facultad de Medicina, Universidad Autónoma de Madrid, Madrid, Spain
c Centro de Investigación en Red de Enfermedades Respiratorias (CIBERES), Instituto de Salud Carlos III (ISCIII), Madrid, Spain
d Department of Health Sciences, Università degli Studi di Milano, Milan, Italy
e Respiratory Unit, ASST Santi Paolo e Carlo, Milan, Italy
f Department of Health Sciences, Università degli Studi di Milano, Milan, Italy
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        "titulo" => "Estimaci&#243;n de las tendencias de infecci&#243;n por COVID-19 y de nuevos ingresos hospitalarios en Espa&#241;a debido a la variante &#211;micron del SARS-CoV-2"
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    "textoCompleto" => "<span class="elsevierStyleSections"><p id="par0005" class="elsevierStylePara elsevierViewall">Spain has been among the hardest hit countries by COVID-19 worldwide&#44; particularly during the first wave and the ongoing sixth wave&#46;<a class="elsevierStyleCrossRef" href="#bib0105"><span class="elsevierStyleSup">1</span></a> There have been several successful attempts to forecast trends of incidence and mortality of COVID-19&#44; most based upon knowledge on viral dynamics from previous pandemics&#44; recent COVID-19 geographical information of diverse granularity&#44; and newly discovered viral characteristics&#46;<a class="elsevierStyleCrossRefs" href="#bib0110"><span class="elsevierStyleSup">2&#8211;4</span></a> However&#44; SARS-CoV-2 inherent poor quality RNAm copy-editing gene replication makes it prone to mutate and spontaneously create new variants of concern &#40;VoC&#41; &#40;<a class="elsevierStyleCrossRef" href="#fig0005">Fig&#46; 1</a>&#41;&#44;<a class="elsevierStyleCrossRef" href="#bib0125"><span class="elsevierStyleSup">5</span></a> that adapt to any hostile environment&#44; produce new outbreaks&#44; and modify existing epidemiological projections&#46;<a class="elsevierStyleCrossRef" href="#bib0130"><span class="elsevierStyleSup">6</span></a></p><elsevierMultimedia ident="fig0005"></elsevierMultimedia><p id="par0010" class="elsevierStylePara elsevierViewall">On November 26&#44; 2021&#44; WHO designated the variant B&#46;1&#46;1&#46;529 as a new VoC&#44; named Omicron&#44; originally identified in South Africa&#44;<a class="elsevierStyleCrossRef" href="#bib0135"><span class="elsevierStyleSup">7</span></a> on the evidence that mutations in Omicron may have an impact on how it spreads&#44; resistance to vaccination&#44; or the severity of illness it causes&#46;<a class="elsevierStyleCrossRef" href="#bib0140"><span class="elsevierStyleSup">8</span></a> In particular&#44; in South Africa up to December 2&#44; 2021 it was observed a doubling time for the first 3 days after the wave threshold of ten cases per 100<span class="elsevierStyleHsp" style=""></span>000 population&#46;<a class="elsevierStyleCrossRefs" href="#bib0145"><span class="elsevierStyleSup">9&#44;10</span></a> In Denmark&#44; a European leader in sequencing SARS-CoV-2 VoC&#44; where testing of all positive PCR tests is commonplace&#44; cases of Omicron were reported to double every second day&#44;<a class="elsevierStyleCrossRef" href="#bib0155"><span class="elsevierStyleSup">11</span></a> despite almost 75&#37; of those infected by Omicron had received full &#40;two doses of&#41; COVID-19 vaccination already&#46;</p><p id="par0015" class="elsevierStylePara elsevierViewall">We used our previous modelling algorithms&#44;<a class="elsevierStyleCrossRefs" href="#bib0160"><span class="elsevierStyleSup">12&#8211;14</span></a> to forecast the spread of Omicron in Spain&#44; and report trends in daily cases with a 7-day moving average and of new hospitalisations&#46; We followed EQUATOR&#39;s TRIPOD guidance for multivariable prediction models&#46;<a class="elsevierStyleCrossRef" href="#bib0175"><span class="elsevierStyleSup">15</span></a> By applying firstly a third-degree polynomial curve in existing epidemiological trends on the spread of Omicron in Spain&#44; starting from the first 17 days of the Omicron outbreak &#40;from December 12&#44; 2021&#41;&#44; and secondly a Gaussian curve following a parametric growth&#44;<a class="elsevierStyleCrossRefs" href="#bib0160"><span class="elsevierStyleSup">12&#8211;14</span></a> we were able to model new infections of COVID-19 in Spain&#46; Overall&#44; the worse scenario is forecasting up to 431&#44;348 COVID-19 daily infections on January&#44; 24&#44; 2022 while the &#8220;best&#8221; scenario is 247&#44;620 &#40;<a class="elsevierStyleCrossRef" href="#fig0010">Fig&#46; 2</a>&#41;&#46;</p><elsevierMultimedia ident="fig0010"></elsevierMultimedia><p id="par0020" class="elsevierStylePara elsevierViewall">Then we modelled these trends for new COVID-19 cases and hospital admissions using a new Gaussian curve to estimate a downward trend after a peak&#44;<a class="elsevierStyleCrossRef" href="#bib0180"><span class="elsevierStyleSup">16</span></a> and we obtained the expected curve of new COVID-19 infections in Spain&#44; and with a 5-day lag time&#44; new hospital admissions&#46; It will likely produce crowding in hospitals&#44; as new hospital admissions per day might peak on January 30&#44; 2022&#44; with a range in between 4210 &#40;&#8220;best&#8221; scenario&#41; and 7333 &#40;worse scenario&#41;&#46; Both epidemiological indicators will surpass previous rates observed in the previous five waves&#44; unless both individual and group interventions are taking place&#46; Beyond the futility of debating on an alleged lower severity of Omicron&#39;s acute COVID-19 clinical expression&#44; any further consequences on its sequelae and long COVID will require close monitoring&#46;<a class="elsevierStyleCrossRef" href="#bib0185"><span class="elsevierStyleSup">17</span></a></p><p id="par0025" class="elsevierStylePara elsevierViewall">In probability theory&#44; the conditional expectation of any warning system for an eventual surge of an infectious outbreak&#44; as could happen with Omicron substituting other SAR-CoV-2 VoC&#44; modifies &#40;reduces&#41; the eventual magnitude of the event itself&#46;<a class="elsevierStyleCrossRef" href="#bib0190"><span class="elsevierStyleSup">18</span></a> Given preliminary evidence from South Africa&#44; our forecast anticipates a large COVID-19 increase in Spain despite the high levels of vaccination&#46;<a class="elsevierStyleCrossRef" href="#bib0195"><span class="elsevierStyleSup">19</span></a> Therefore&#44; this warning is calling for further reinforcing of universal hygiene interventions &#40;indoor ventilation&#44; social distance&#44; and face masks&#41;&#44; and anticipating the need of new lockdowns&#44;<a class="elsevierStyleCrossRef" href="#bib0155"><span class="elsevierStyleSup">11</span></a> the latter being extremely detrimental to the economy&#46;</p><p id="par0030" class="elsevierStylePara elsevierViewall">All viruses change in time and space by natural or artificial Darwin&#39;s selection&#44; and survival of the fittest&#44;<a class="elsevierStyleCrossRef" href="#bib0200"><span class="elsevierStyleSup">20</span></a> due either to high levels of herd immunity or low vaccination coverage&#46; The toll associated with Omicron underlines WHO&#39;s COVID-19 message that &#8220;No one will be safe&#44; until the entire World is safe &#40;ergo vaccinated&#41;&#8221;&#46;</p><span id="sec0005" class="elsevierStyleSection elsevierViewall"><span class="elsevierStyleSectionTitle" id="sect0005">Funding</span><p id="par0035" class="elsevierStylePara elsevierViewall">None declared&#46;</p></span></span>"
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ISSN: 03002896
Original language: English
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